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extract characters between two commas?
Text processing - join every two lines with commasRemove entire row in a file if first column is repeatedMerging two files, one column at a timeJoin two textfiles on 1st column keeping order and unpairable lines from 1st fileHow to print lines if two fields have identical values?Delete lines that matches a string before commahow to remove comma and strings after a comma in a file?Fastest way to sum Nth column in text fileHow to extract the first row for each entry in the first column?Compare two files and get unmatched rows from the second file based on first and second column
.everyoneloves__top-leaderboard:empty,.everyoneloves__mid-leaderboard:empty,.everyoneloves__bot-mid-leaderboard:empty margin-bottom:0;
I have a file with ~ 3 million rows, here is the first few lines of my file:
head out.txt
NA
NA
NA
NA
NA
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753,gene85754
gene85752,gene85753,gene85754
gene85752,gene85753,gene85754
gene85752,gene85753,gene85754
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752
gene85752
For those rows that are separated by ",", I want to keep everything after the first comma and before the second comma.
This is my desired output:
outgood.txt
NA
NA
NA
NA
NA
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85752
gene85752
text-processing awk
asked 3 hours ago
Anna1364Anna1364
439213
add a comment |
I have a file with ~ 3 million rows, here is the first few lines of my file:
head out.txt
NA
NA
NA
NA
NA
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753,gene85754
gene85752,gene85753,gene85754
gene85752,gene85753,gene85754
gene85752,gene85753,gene85754
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752
gene85752
For those rows that are separated by ",", I want to keep everything after the first comma and before the second comma.
This is my desired output:
outgood.txt
NA
NA
NA
NA
NA
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85752
gene85752
text-processing awk
asked 3 hours ago
Anna1364Anna1364
439213
add a comment |
I have a file with ~ 3 million rows, here is the first few lines of my file:
head out.txt
NA
NA
NA
NA
NA
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753,gene85754
gene85752,gene85753,gene85754
gene85752,gene85753,gene85754
gene85752,gene85753,gene85754
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752
gene85752
For those rows that are separated by ",", I want to keep everything after the first comma and before the second comma.
This is my desired output:
outgood.txt
NA
NA
NA
NA
NA
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85752
gene85752
text-processing awk
asked 3 hours ago
Anna1364Anna1364
439213
I have a file with ~ 3 million rows, here is the first few lines of my file:
head out.txt
NA
NA
NA
NA
NA
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753,gene85754
gene85752,gene85753,gene85754
gene85752,gene85753,gene85754
gene85752,gene85753,gene85754
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752,gene85753
gene85752
gene85752
For those rows that are separated by ",", I want to keep everything after the first comma and before the second comma.
This is my desired output:
outgood.txt
NA
NA
NA
NA
NA
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85753
gene85752
gene85752
text-processing awk
text-processing awk
asked 3 hours ago
Anna1364Anna1364
439213
asked 3 hours ago
Anna1364Anna1364
439213
asked 3 hours ago
Anna1364Anna1364
439213
asked 3 hours ago
Anna1364Anna1364
439213
asked 3 hours ago
Anna1364Anna1364
439213
439213
add a comment |
add a comment |
3 Answers
3
active
oldest
votes
Since cut prints non-delimited lines by default the following works
cut -f2 -d, file
answered 2 hours ago
iruvariruvar
12.3k63062
1
It's nice when someone remember the little quirks of standard tools.
– Kusalananda♦
2 hours ago
add a comment |
awk -F, 'NF > 1 $1 = $2 print $1 ' file
This uses awk to parse the file as lines consisting of comma-delimited fields.
The code detects when there is more than a single field on a line, and when there is, the first field is replaced by the second field. The first field, either unmodified or modified by the conditional code, is then printed.
answered 2 hours ago
Kusalananda♦Kusalananda
140k17261435
With a big file, this would probably be faster:awk -F, 'print(NF>1 ? $2 : $1)'-- since you won't have to rewrite $0
– glenn jackman
1 hour ago
@glennjackman Well, thecutsolution would be even faster in any case.
– Kusalananda♦
1 hour ago
add a comment |
awk -F, 'NF == 1 print $1
NF > 1 print $2' filename
This will print just the first string if there is no comma, second string if there is one or more comma.
answered 2 hours ago
unxnutunxnut
3,79721120
add a comment |
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3 Answers
3
active
oldest
votes
3 Answers
3
active
oldest
votes
active
oldest
votes
active
oldest
votes
Since cut prints non-delimited lines by default the following works
cut -f2 -d, file
answered 2 hours ago
iruvariruvar
12.3k63062
1
It's nice when someone remember the little quirks of standard tools.
– Kusalananda♦
2 hours ago
add a comment |
Since cut prints non-delimited lines by default the following works
cut -f2 -d, file
answered 2 hours ago
iruvariruvar
12.3k63062
1
It's nice when someone remember the little quirks of standard tools.
– Kusalananda♦
2 hours ago
add a comment |
Since cut prints non-delimited lines by default the following works
cut -f2 -d, file
answered 2 hours ago
iruvariruvar
12.3k63062
Since cut prints non-delimited lines by default the following works
cut -f2 -d, file
answered 2 hours ago
iruvariruvar
12.3k63062
answered 2 hours ago
iruvariruvar
12.3k63062
answered 2 hours ago
iruvariruvar
12.3k63062
answered 2 hours ago
iruvariruvar
12.3k63062
12.3k63062
1
It's nice when someone remember the little quirks of standard tools.
– Kusalananda♦
2 hours ago
add a comment |
1
It's nice when someone remember the little quirks of standard tools.
– Kusalananda♦
2 hours ago
1
1
It's nice when someone remember the little quirks of standard tools.
– Kusalananda♦
2 hours ago
It's nice when someone remember the little quirks of standard tools.
– Kusalananda♦
2 hours ago
add a comment |
awk -F, 'NF > 1 $1 = $2 print $1 ' file
This uses awk to parse the file as lines consisting of comma-delimited fields.
The code detects when there is more than a single field on a line, and when there is, the first field is replaced by the second field. The first field, either unmodified or modified by the conditional code, is then printed.
answered 2 hours ago
Kusalananda♦Kusalananda
140k17261435
With a big file, this would probably be faster:awk -F, 'print(NF>1 ? $2 : $1)'-- since you won't have to rewrite $0
– glenn jackman
1 hour ago
@glennjackman Well, thecutsolution would be even faster in any case.
– Kusalananda♦
1 hour ago
add a comment |
awk -F, 'NF > 1 $1 = $2 print $1 ' file
This uses awk to parse the file as lines consisting of comma-delimited fields.
The code detects when there is more than a single field on a line, and when there is, the first field is replaced by the second field. The first field, either unmodified or modified by the conditional code, is then printed.
answered 2 hours ago
Kusalananda♦Kusalananda
140k17261435
With a big file, this would probably be faster:awk -F, 'print(NF>1 ? $2 : $1)'-- since you won't have to rewrite $0
– glenn jackman
1 hour ago
@glennjackman Well, thecutsolution would be even faster in any case.
– Kusalananda♦
1 hour ago
add a comment |
awk -F, 'NF > 1 $1 = $2 print $1 ' file
This uses awk to parse the file as lines consisting of comma-delimited fields.
The code detects when there is more than a single field on a line, and when there is, the first field is replaced by the second field. The first field, either unmodified or modified by the conditional code, is then printed.
answered 2 hours ago
Kusalananda♦Kusalananda
140k17261435
awk -F, 'NF > 1 $1 = $2 print $1 ' file
This uses awk to parse the file as lines consisting of comma-delimited fields.
The code detects when there is more than a single field on a line, and when there is, the first field is replaced by the second field. The first field, either unmodified or modified by the conditional code, is then printed.
answered 2 hours ago
Kusalananda♦Kusalananda
140k17261435
answered 2 hours ago
Kusalananda♦Kusalananda
140k17261435
answered 2 hours ago
Kusalananda♦Kusalananda
140k17261435
answered 2 hours ago
Kusalananda♦Kusalananda
140k17261435
140k17261435
With a big file, this would probably be faster:awk -F, 'print(NF>1 ? $2 : $1)'-- since you won't have to rewrite $0
– glenn jackman
1 hour ago
@glennjackman Well, thecutsolution would be even faster in any case.
– Kusalananda♦
1 hour ago
add a comment |
With a big file, this would probably be faster:awk -F, 'print(NF>1 ? $2 : $1)'-- since you won't have to rewrite $0
– glenn jackman
1 hour ago
@glennjackman Well, thecutsolution would be even faster in any case.
– Kusalananda♦
1 hour ago
With a big file, this would probably be faster:
awk -F, 'print(NF>1 ? $2 : $1)' -- since you won't have to rewrite $0– glenn jackman
1 hour ago
With a big file, this would probably be faster:
awk -F, 'print(NF>1 ? $2 : $1)' -- since you won't have to rewrite $0– glenn jackman
1 hour ago
@glennjackman Well, the
cut solution would be even faster in any case.– Kusalananda♦
1 hour ago
@glennjackman Well, the
cut solution would be even faster in any case.– Kusalananda♦
1 hour ago
add a comment |
awk -F, 'NF == 1 print $1
NF > 1 print $2' filename
This will print just the first string if there is no comma, second string if there is one or more comma.
answered 2 hours ago
unxnutunxnut
3,79721120
add a comment |
awk -F, 'NF == 1 print $1
NF > 1 print $2' filename
This will print just the first string if there is no comma, second string if there is one or more comma.
answered 2 hours ago
unxnutunxnut
3,79721120
add a comment |
awk -F, 'NF == 1 print $1
NF > 1 print $2' filename
This will print just the first string if there is no comma, second string if there is one or more comma.
answered 2 hours ago
unxnutunxnut
3,79721120
awk -F, 'NF == 1 print $1
NF > 1 print $2' filename
This will print just the first string if there is no comma, second string if there is one or more comma.
answered 2 hours ago
unxnutunxnut
3,79721120
answered 2 hours ago
unxnutunxnut
3,79721120
answered 2 hours ago
unxnutunxnut
3,79721120
answered 2 hours ago
unxnutunxnut
3,79721120
3,79721120
add a comment |
add a comment |
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